BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H02SP1|AL430297
(614 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1538 493 e-139
>3x_Contig1538
Length = 9120
Score = 493 bits (241), Expect = e-139
Identities = 281/300 (93%), Gaps = 4/300 (1%)
Strand = Plus / Minus
Query: 1 gatcaaaatgnatacttattgaataactctgttgtcttctttgaggtttggataacaggc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3798 gatcaaaatg-atacttattgaataactctgttgtcttctttgaggtttggataacaggc 3740
Query: 61 ggatggattgggacttttacgtcttcaacccgcttagagggagatgtatcttgaactagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3739 ggatggattgggacttttacgtcttcaacccgcttagagggagatgtatcttgaactagg 3680
Query: 121 acaggagstgtttsagtgtcaaacattgatgagtcagtgcccggttsttsggttttgatt 180
||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 3679 acaggagctgtttcagtgtcaaacattgatgagtcagtgcccggttcttcggttttgatt 3620
Query: 181 attgttactgatttaggggtattsmtagtacgaatattcaaagtaggttttgagaagtta 240
||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||
Sbjct: 3619 attgttactgatttaggggtattcatagt-cga--tttcaaagtaggttttgagaagtta 3563
Query: 241 ggasccttcgctttggctaaaggtattttsasstsgtssatattsaatatggatttttgt 300
||| ||||||||||||||||||||||||| | | || ||||| |||||||||||||||
Sbjct: 3562 ggacccttcgctttggctaaaggtattttcacctcgtccatattcaatatggatttttgt 3503
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2549
Number of Sequences: 1807
Number of extensions: 2549
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 614
length of database: 10,358,551
effective HSP length: 16
effective length of query: 598
effective length of database: 10,329,639
effective search space: 6177124122
effective search space used: 6177124122
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)